Package: PlotTrellis 0.0.0.9000

PlotTrellis: Composable Genomic Track Visualisations for Non-Coders

A plotgardener-based genomic track composer that lets biologists build common EDA visualisations (coverage, Hi-C, splice junctions, transcript structure, protein domains) via a Shiny interface, without writing code, and download a standalone R script that reproduces the exact figure offline.

Authors:Aleksander Pacnik [aut, cre]

PlotTrellis_0.0.0.9000.tar.gz
PlotTrellis_0.0.0.9000.zip(r-4.7-any)PlotTrellis_0.0.0.9000.zip(r-4.6-any)PlotTrellis_0.0.0.9000.zip(r-4.5-any)
PlotTrellis_0.0.0.9000.tgz(r-4.6-any)PlotTrellis_0.0.0.9000.tgz(r-4.5-any)
PlotTrellis_0.0.0.9000.tar.gz(r-4.7-any)PlotTrellis_0.0.0.9000.tar.gz(r-4.6-any)
PlotTrellis_0.0.0.9000.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
PlotTrellis/json (API)

# Install 'PlotTrellis' in R:
install.packages('PlotTrellis', repos = c('https://aleks-wehi.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/aleks-wehi/plottrellis/issues

On CRAN:

Conda:

1.00 score 1 exports 139 dependencies

Last updated from:07f6f2a407. Checks:8 ERROR, 1 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-develERROR383
source / vignettesERROR3335
linux-releaseERROR391
macos-releaseERROR349
macos-oldrelERROR302
windows-develERROR292
windows-releaseERROR305
windows-oldrelERROR290
wasm-releaseOK219

Exports:PlotTrellisApp

Dependencies:AnnotationDbiaskpassassertthatbackportsbase64encBHBiobaseBiocBaseUtilsBiocFileCacheBiocGenericsBiocIObiocmakeBiocParallelbiomaRtBiostringsbitbit64bitopsblobbslibcachemcheckmatecigarilloclicodetoolscommonmarkcpp11crayoncurldata.tableDBIdbplyrdigestdir.expirydplyrevaluatefarverfastmapfilelockfontawesomeformatRfsfutile.loggerfutile.optionsgenericsGenomeInfoDbGenomicAlignmentsGenomicFeaturesGenomicRangesggplot2ggplotifygluegridGraphicsgtablehighrhmshtmltoolshtmlwidgetshttpuvhttrhttr2IRangesisobandjquerylibjsonliteKEGGRESTknitrlabelinglambda.rlaterlearnrlifecyclelitedownmagrittrmarkdownmemoisemimeopensslotelpillarpkgconfigplotgardenerplyrangespngprettyunitsprogresspromisespurrrR6rappdirsRColorBrewerRcppRCurlrenvrestfulrrhdf5rhdf5filtersRhdf5libRhtslibrjsonrlangrmarkdownrprojrootRsamtoolsRSQLitertracklayerS4VectorsS7sassscalesSeqinfoshinysnowsortablesourcetoolsstrawrstringistringrsvglitesyssystemfontstextshapingtibbletidyrtidyselecttinytextxdbmakerUCSC.utilsutf8vctrsviridisLitewithrxfunXMLxml2xtableXVectoryamlyulab.utils